Could I safely use loc_cnt=1 to get uniquely mapped SNPs on the “reference” genome?
Related Questions
- If rs2000 was located 5 bases upstream of rs1000 in the genome, would each of these SNPs appear in the others rs file even though they appear in each other’s flanking sequence?
- Are there any refSNP fields that indicate which SNP allele matches the reference genome sequence upon which the SNP was mapped?
- Does dbSNP have a file that contains SNPs in IUPAC code for the entire human genome?
