Im in the process of updating the InterPro to GO mappings that I have stored locally and noticed that some InterPro motifs that previously had GO terms associated no longer do so, is this correct?
It is certainly possible for GO terms to be removed. Reasons for terms being removed include: the InterPro accession number becomes a secondary accession number; the method in the entry is altered and this changes it’s scope of protein matches; correction of annotation in the entry; GO terms become obsolete etc.
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