Important Notice: Our web hosting provider recently started charging us for additional visits, which was unexpected. In response, we're seeking donations. Depending on the situation, we may explore different monetization options for our Community and Expert Contributors. It's crucial to provide more returns for their expertise and offer more Expert Validated Answers or AI Validated Answers. Learn more about our hosting issue here.

In the “Integrated Maps” section of rs55956772, it appears that each assembly maps the refSNP to different chromosomes without overlap. Is this due to small flanking sequence?

April 26, 2017appears assembly chromosomes different Maps refsnp section

0

Posted

In the “Integrated Maps” section of rs55956772, it appears that each assembly maps the refSNP to different chromosomes without overlap. Is this due to small flanking sequence?

1 Answer

0

Posted

rs6523677 is annotated as “A” in the reference sequences, but the genotyping (HapMap) of 300 individuals shows a “C” for all alleles. It’s very unlikely that genotyping of any 300 individuals will show a “C” allele 300 times.