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How can I visualize enzyme-ligand interactions?

April 26, 2017Visualize

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How can I visualize enzyme-ligand interactions?

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At present each interaction in the detailed list of interactions is linked to the relevant file in PDBsum which provides a 2D LIGPLOT representation of the ligand and the surrounding side chains of the protein. While we will retain this link, we plan to add a rotatable 3D representation of the binding site using the Java-based Jmol molecular viewer.