How do I convert sequence identifiers of either Agilent or Affymetrix to the yeast ORF name they are reporting on?
Using the data analysis pipeline, data must be retrieved, and the .pcl file placed in your repository. From the repository, click on for the .pcl file to be converted to yeast ORF names. Choose the curated synthetic gene list, “ORFs”, with the radio button “Remove all original data”. Click the “Calculate Synthetic Genes” button, and then either download the resulting PreClustering file or proceed to gene filtering.